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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP34040.1Peptidase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. (1891 aa)    
Predicted Functional Partners:
pbpC
Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.952
AOP34042.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.721
AOP34043.1
VWA containing CoxE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.717
AOP32626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.618
AOP34200.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
AOP34038.1
Peptidase C69; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AOP34039.1
Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AOP36359.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
AOP35831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.491
AOP34037.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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