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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP34513.1Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)    
Predicted Functional Partners:
AOP36653.1
Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.917
AOP35098.1
Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.909
AOP36054.1
D-alanine--D-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.893
AOP34512.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.833
cheR_1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.785
AOP34066.1
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.785
AOP34514.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.700
AOP34975.1
3-oxoacid CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.687
AOP34515.1
Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.643
AOP36595.1
Elongation factor P--(R)-beta-lysine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.616
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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