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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP35043.1DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
AOP35506.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.659
AOP35921.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
AOP36626.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.620
AOP33913.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.609
AOP32660.1
Bacteriocin-protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
AOP36468.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
AOP35044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.536
AOP36628.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
AOP36280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.505
AOP36281.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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