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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP35508.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (175 aa)    
Predicted Functional Partners:
AOP35509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
pheA
P-protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.669
AOP32490.1
Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.668
A0128_16905
Isochorismatase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.625
AOP35510.1
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.566
AOP33526.1
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.517
AOP35507.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.511
AOP35511.1
Membrane protease subunit, stomatin/prohibitin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
fusA
Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
    
  0.497
AOP35178.1
Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.497
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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