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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP36176.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
AOP35670.1
Endoflagellar motor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.840
AOP35671.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.840
AOP35669.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.836
AOP35668.1
Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
AOP35672.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.700
AOP35673.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.700
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.577
AOP35675.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.571
AOP35676.1
DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.401
AOP35677.1
DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.400
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.