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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP36467.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (200 aa)    
Predicted Functional Partners:
coxB
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.924
AOP36466.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.792
AOP32785.1
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.625
AOP34249.1
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.625
AOP36468.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.613
AOP35628.1
Cytochrome oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.579
AOP36469.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
AOP36464.1
Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.566
AOP36465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.552
AOP36470.1
TolQ transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.537
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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