Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AOP36474.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)    
Predicted Functional Partners:
AOP36643.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.845
AOP36473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.845
AOP36471.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.837
AOP36472.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.837
AOP36470.1
TolQ transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.699
AOP36469.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.672
AOP36468.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.653
AOP36464.1
Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.444
AOP36476.1
methylmalonyl-CoA mutase; MDM; functions in conversion of succinate to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.416
AOP36477.1
methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.416
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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