STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF72720.1Hypothetical protein. (99 aa)    
Predicted Functional Partners:
SDF72740.1
Hypothetical protein.
       0.803
SDF72758.1
Hypothetical protein.
       0.803
SDF72697.1
Hypothetical protein.
       0.773
SDF72799.1
Hypothetical protein.
       0.681
SDF72782.1
Hypothetical protein.
       0.616
SDF72672.1
Phage major capsid protein E.
       0.594
SDF72655.1
Bacteriophage lambda head decoration protein D.
       0.476
SDF72842.1
Phage related hypothetical protein.
       0.422
SDF72820.1
Hypothetical protein.
       0.419
Your Current Organism:
Halomonas taeanensis
NCBI taxonomy Id: 284577
Other names: DSM 16463, H. taeanensis, Halomonas sp. BH539, Halomonas taeanensis Lee et al. 2005, KCTC 12284, strain BH539
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.