STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF73482.1Hypothetical protein; Belongs to the UPF0234 family. (161 aa)    
Predicted Functional Partners:
SDF73494.1
Hypothetical protein.
       0.689
SDF73521.1
Aminopeptidase N.
       0.644
SDG09136.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.630
SDF73455.1
Ribosomal-protein-alanine acetyltransferase.
       0.604
SDF73572.1
Lipid kinase YegS.
       0.474
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
   
    0.434
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
  
    0.420
SDF73441.1
Glutathione synthase/RimK-type ligase, ATP-grasp superfamily.
     
 0.415
Your Current Organism:
Halomonas taeanensis
NCBI taxonomy Id: 284577
Other names: DSM 16463, H. taeanensis, Halomonas sp. BH539, Halomonas taeanensis Lee et al. 2005, KCTC 12284, strain BH539
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.