STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG21876.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
SDG21849.1
Bacteriophage replication gene A protein (GPA).
       0.773
SDG21894.1
Hypothetical protein.
       0.773
SDG21780.1
Pyocin activator protein PrtN.
       0.661
SDG21807.1
Hypothetical protein.
       0.661
SDG21826.1
Phage/conjugal plasmid C-4 type zinc finger protein, TraR family.
       0.661
SDG21917.1
Hypothetical protein.
       0.561
SDG21941.1
Ogr/Delta-like zinc finger.
       0.550
SDG21962.1
Hypothetical protein.
       0.550
SDG21742.1
5-methylcytosine-specific restriction enzyme A.
       0.500
SDG21766.1
8-oxo-dGTP diphosphatase.
       0.500
Your Current Organism:
Halomonas taeanensis
NCBI taxonomy Id: 284577
Other names: DSM 16463, H. taeanensis, Halomonas sp. BH539, Halomonas taeanensis Lee et al. 2005, KCTC 12284, strain BH539
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.