STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG36532.1Type IV pilus assembly protein PilY1. (1140 aa)    
Predicted Functional Partners:
SDG36594.1
Type IV pilus assembly protein PilV.
 
  
 0.994
SDG36572.1
Type IV pilus assembly protein PilW.
 
  
 0.993
SDG36512.1
Type IV pilus assembly protein PilE.
 
  
 0.992
SDG36552.1
Type IV pilus assembly protein PilX.
 
  
 0.988
SDG36611.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.963
SDF80645.1
Type IV pilus assembly protein PilP.
  
  
 0.787
SDF80605.1
Type IV pilus assembly protein PilN.
 
  
 0.773
SDF80616.1
Type IV pilus assembly protein PilO.
  
  
 0.766
SDG36491.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.721
SDG24318.1
LysM domain-containing protein.
  
     0.703
Your Current Organism:
Halomonas taeanensis
NCBI taxonomy Id: 284577
Other names: DSM 16463, H. taeanensis, Halomonas sp. BH539, Halomonas taeanensis Lee et al. 2005, KCTC 12284, strain BH539
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.