STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG43181.1Phosphinothricin acetyltransferase. (164 aa)    
Predicted Functional Partners:
SDG43205.1
DNA-binding transcriptional regulator, ArsR family.
 
     0.650
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
  
    0.634
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
    0.583
SDF95537.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.581
SDG43241.1
Arsenical resistance protein ArsH.
       0.573
SDG43227.1
Arsenate reductase.
       0.553
SDG43266.1
Arsenite efflux membrane protein ArsB.
     
 0.532
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.509
SDF99338.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.466
SDG43148.1
Hypothetical protein.
       0.450
Your Current Organism:
Halomonas taeanensis
NCBI taxonomy Id: 284577
Other names: DSM 16463, H. taeanensis, Halomonas sp. BH539, Halomonas taeanensis Lee et al. 2005, KCTC 12284, strain BH539
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