STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG44945.1Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (648 aa)    
Predicted Functional Partners:
SDG44968.1
Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD.
 
 0.984
SDF66402.1
Signal transduction histidine kinase.
0.980
SDG05216.1
Multi-sensor hybrid histidine kinase.
 
0.970
SDF84140.1
PAS domain S-box-containing protein.
  
0.945
SDF64837.1
Signal transduction histidine kinase.
0.938
SDG20405.1
Signal transduction histidine kinase.
0.937
SDG44928.1
Transcriptional regulator, GntR family.
 
     0.896
SDF68256.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.882
SDF82106.1
Two-component system, NtrC family, response regulator GlrR.
 
 0.836
SDF82848.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.818
Your Current Organism:
Halomonas taeanensis
NCBI taxonomy Id: 284577
Other names: DSM 16463, H. taeanensis, Halomonas sp. BH539, Halomonas taeanensis Lee et al. 2005, KCTC 12284, strain BH539
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