STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG54305.1Amino acid ABC transporter substrate-binding protein, PAAT family. (285 aa)    
Predicted Functional Partners:
SDG54387.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  0.979
SDG54318.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.961
SDG54366.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.956
SDG15066.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.917
SDF71409.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.895
SDG33830.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  0.873
SDF71431.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.868
SDG53805.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.846
SDG33815.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.841
SDG42802.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.841
Your Current Organism:
Halomonas taeanensis
NCBI taxonomy Id: 284577
Other names: DSM 16463, H. taeanensis, Halomonas sp. BH539, Halomonas taeanensis Lee et al. 2005, KCTC 12284, strain BH539
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