STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG61030.1Phage small terminase subunit. (246 aa)    
Predicted Functional Partners:
SDG61052.1
Phage major capsid protein, P2 family.
 
    0.983
SDG60872.1
Phage virion morphogenesis (putative tail completion) protein.
 
    0.967
SDG60886.1
P2 phage tail completion protein R (GpR).
 
    0.967
SDG61012.1
Phage head completion protein (GPL).
 
    0.966
SDG60995.1
P2-like prophage tail protein X.
 
    0.965
SDG61323.1
Phage capsid scaffolding protein (GPO) serine peptidase.
 
    0.957
SDG61342.1
Uncharacterized protein YjcR.
 
    0.956
SDG61301.1
Phage major capsid protein, P2 family.
 
    0.932
SDG61231.1
P2-like prophage tail protein X.
 
    0.931
SDG61257.1
Phage head completion protein (GPL).
 
    0.931
Your Current Organism:
Halomonas taeanensis
NCBI taxonomy Id: 284577
Other names: DSM 16463, H. taeanensis, Halomonas sp. BH539, Halomonas taeanensis Lee et al. 2005, KCTC 12284, strain BH539
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