Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOO37091.1 | KOO50321.1 | AMD01_21625 | AMD01_00735 | Nitrogen fixation protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology. | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
| KOO41091.1 | KOO50317.1 | AMD01_19265 | AMD01_00715 | Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.765 |
| KOO41091.1 | KOO50319.1 | AMD01_19265 | AMD01_00725 | Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.818 |
| KOO41091.1 | KOO50320.1 | AMD01_19265 | AMD01_00730 | Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
| KOO41091.1 | KOO50321.1 | AMD01_19265 | AMD01_00735 | Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.699 |
| KOO41091.1 | paaA | AMD01_19265 | AMD01_00720 | Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. | AAA family ATPase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
| KOO47137.1 | KOO50319.1 | AMD01_07230 | AMD01_00725 | enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.604 |
| KOO47137.1 | KOO50320.1 | AMD01_07230 | AMD01_00730 | enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.596 |
| KOO47137.1 | KOO50321.1 | AMD01_07230 | AMD01_00735 | enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.659 |
| KOO47137.1 | KOO50323.1 | AMD01_07230 | AMD01_00745 | enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.646 |
| KOO47137.1 | paaA | AMD01_07230 | AMD01_00720 | enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | AAA family ATPase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| KOO50317.1 | KOO41091.1 | AMD01_00715 | AMD01_19265 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. | 0.765 |
| KOO50317.1 | KOO50319.1 | AMD01_00715 | AMD01_00725 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| KOO50317.1 | KOO50320.1 | AMD01_00715 | AMD01_00730 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.961 |
| KOO50317.1 | KOO50321.1 | AMD01_00715 | AMD01_00735 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.941 |
| KOO50317.1 | KOO50322.1 | AMD01_00715 | AMD01_00740 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.672 |
| KOO50317.1 | KOO50323.1 | AMD01_00715 | AMD01_00745 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.566 |
| KOO50317.1 | KOO50327.1 | AMD01_00715 | AMD01_00765 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | PaaX family transcrtiptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.698 |
| KOO50317.1 | paaA | AMD01_00715 | AMD01_00720 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | AAA family ATPase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| KOO50319.1 | KOO41091.1 | AMD01_00725 | AMD01_19265 | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. | 0.818 |
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