Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOO37291.1 | KOO40729.1 | AMD01_22760 | AMD01_20705 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.801 |
| KOO37291.1 | KOO42339.1 | AMD01_22760 | AMD01_18380 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| KOO37291.1 | KOO43975.1 | AMD01_22760 | AMD01_14730 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.798 |
| KOO37291.1 | KOO44039.1 | AMD01_22760 | AMD01_15060 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
| KOO37291.1 | KOO44040.1 | AMD01_22760 | AMD01_15065 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
| KOO37291.1 | KOO44041.1 | AMD01_22760 | AMD01_15070 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.756 |
| KOO37291.1 | KOO50463.1 | AMD01_22760 | AMD01_01530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.779 |
| KOO37291.1 | gpr | AMD01_22760 | AMD01_14045 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.773 |
| KOO40729.1 | KOO37291.1 | AMD01_20705 | AMD01_22760 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.801 |
| KOO40729.1 | KOO42339.1 | AMD01_20705 | AMD01_18380 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.798 |
| KOO40729.1 | KOO43975.1 | AMD01_20705 | AMD01_14730 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| KOO40729.1 | KOO44039.1 | AMD01_20705 | AMD01_15060 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| KOO40729.1 | KOO44040.1 | AMD01_20705 | AMD01_15065 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| KOO40729.1 | KOO44041.1 | AMD01_20705 | AMD01_15070 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| KOO40729.1 | KOO50463.1 | AMD01_20705 | AMD01_01530 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.770 |
| KOO40729.1 | gpr | AMD01_20705 | AMD01_14045 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Peptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.771 |
| KOO42339.1 | KOO37291.1 | AMD01_18380 | AMD01_22760 | Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| KOO42339.1 | KOO40729.1 | AMD01_18380 | AMD01_20705 | Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.798 |
| KOO42339.1 | KOO43975.1 | AMD01_18380 | AMD01_14730 | Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| KOO42339.1 | KOO44039.1 | AMD01_18380 | AMD01_15060 | Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
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