Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOO37349.1 | KOO41094.1 | AMD01_23060 | AMD01_19280 | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
| KOO37349.1 | KOO43890.1 | AMD01_23060 | AMD01_14210 | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| KOO37349.1 | KOO46802.1 | AMD01_23060 | AMD01_07720 | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
| KOO37349.1 | KOO50574.1 | AMD01_23060 | AMD01_02155 | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
| KOO37349.1 | KOO50616.1 | AMD01_23060 | AMD01_02385 | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.970 |
| KOO37349.1 | KOO50617.1 | AMD01_23060 | AMD01_02390 | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | Quinol oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.995 |
| KOO37349.1 | KOO50946.1 | AMD01_23060 | AMD01_03410 | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| KOO37349.1 | ctaA | AMD01_23060 | AMD01_02375 | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. | 0.718 |
| KOO41094.1 | KOO37349.1 | AMD01_19280 | AMD01_23060 | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | 0.580 |
| KOO41094.1 | KOO50616.1 | AMD01_19280 | AMD01_02385 | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.943 |
| KOO41094.1 | KOO50946.1 | AMD01_19280 | AMD01_03410 | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.831 |
| KOO43890.1 | KOO37349.1 | AMD01_14210 | AMD01_23060 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | 0.921 |
| KOO43890.1 | KOO50616.1 | AMD01_14210 | AMD01_02385 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
| KOO43890.1 | KOO50617.1 | AMD01_14210 | AMD01_02390 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.919 |
| KOO43890.1 | KOO50620.1 | AMD01_14210 | AMD01_02405 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
| KOO43890.1 | KOO50946.1 | AMD01_14210 | AMD01_03410 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.596 |
| KOO43890.1 | ctaA | AMD01_14210 | AMD01_02375 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. | 0.751 |
| KOO46802.1 | KOO37349.1 | AMD01_07720 | AMD01_23060 | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | 0.580 |
| KOO46802.1 | KOO50616.1 | AMD01_07720 | AMD01_02385 | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.943 |
| KOO46802.1 | KOO50946.1 | AMD01_07720 | AMD01_03410 | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.803 |
page 1 of 3