STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOO47084.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)    
Predicted Functional Partners:
KOO47645.1
Sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.645
KOO47552.1
NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
   
    0.628
KOO46096.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.628
KOO43483.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.544
KOO43444.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.540
KOO41062.1
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.540
KOO46807.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.532
KOO42884.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.532
KOO50280.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.515
KOO52718.1
Butanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.479
Your Current Organism:
Bacillus koreensis
NCBI taxonomy Id: 284581
Other names: B. koreensis, Bacillus koreensis Lim et al. 2006, Bacillus sp. BR030, DSM 16467, KCTC 3914, strain BR030
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.