Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KOO46774.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)    
Predicted Functional Partners:
KOO46772.1
rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.698
KOO46773.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.698
KOO46775.1
Glycogen biosynthesis protein GlgD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
tlp
Small acid-soluble spore protein Tlp; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Tlp family.
   
    0.587
sspK
Spore protein K; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspK family.
   
    0.568
sspP
SASP P; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspP family.
   
    0.555
sspO
SASP O; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspO family.
   
    0.528
KOO47026.1
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
KOO43899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.498
sspN
Spore protein N; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspN family.
   
    0.443
Your Current Organism:
Bacillus koreensis
NCBI taxonomy Id: 284581
Other names: B. koreensis, Bacillus koreensis Lim et al. 2006, Bacillus sp. BR030, DSM 16467, KCTC 3914, strain BR030
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.