Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KOO46030.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
KOO41911.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.710
prpE
Bis(5'-nucleosyl)-tetraphosphatase; Asymmetrically hydrolyzes Ap4p to yield AMP and ATP.
   
   0.570
KOO46449.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.570
KOO43004.1
Diadenosine tetraphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.570
KOO46125.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.562
KOO42826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
KOO46086.1
Diamine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.503
KOO47522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
KOO45960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
KOO46031.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.469
Your Current Organism:
Bacillus koreensis
NCBI taxonomy Id: 284581
Other names: B. koreensis, Bacillus koreensis Lim et al. 2006, Bacillus sp. BR030, DSM 16467, KCTC 3914, strain BR030
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