Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KOO43938.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)    
Predicted Functional Partners:
KOO43936.1
Competence protein ComG; Required for transformation and DNA binding.
  
  
 0.991
KOO43935.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.974
KOO43934.1
Competence protein ComG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.955
KOO43941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.925
KOO46960.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.893
KOO44121.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
KOO46958.1
Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.868
aroK
Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.855
KOO43937.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.816
KOO46964.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.801
Your Current Organism:
Bacillus koreensis
NCBI taxonomy Id: 284581
Other names: B. koreensis, Bacillus koreensis Lim et al. 2006, Bacillus sp. BR030, DSM 16467, KCTC 3914, strain BR030
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