STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLLA0_D06633gKLLA0D06633p. (1023 aa)    
Predicted Functional Partners:
KLLA0_E20769g
KLLA0E20769p.
   
  
 0.580
KLLA0_A04884g
KLLA0A04884p.
      
 0.555
KLLA0_B05665g
KLLA0B05665p.
      
 0.539
KLLA0_A00803g
KLLA0A00803p.
      
 0.538
KLLA0_C09801g
KLLA0C09801p.
    
 
 0.479
KLLA0_C14157g
KLLA0C14157p.
   
  
 0.467
KLLA0_A02321g
KLLA0A02321p.
      
 0.461
KLLA0_C04279g
KLLA0C04279p.
      
 0.446
KLLA0_B13563g
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
    
 
 0.437
KLLA0_A04499g
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.436
Your Current Organism:
Kluyveromyces lactis
NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140
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