STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCB2Serine palmitoyltransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (562 aa)    
Predicted Functional Partners:
KLLA0_A09955g
KLLA0A09955p.
  
0.999
TSC10
3-ketodihydrosphingosine reductase TSC10; Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.984
KLLA0_B13948g
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.951
KLLA0_E10649g
Tryptophan synthase.
    
 0.909
KLLA0_D04840g
KLLA0D04840p.
     
  0.900
KLLA0_A09471g
KLLA0A09471p.
     
  0.900
KLLA0_B05621g
KLLA0B05621p.
    
 
 0.886
KLLA0_F08921g
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.837
SHM1
Serine hydroxymethyltransferase, mitochondrial; Interconversion of serine and glycine.
  
 
 0.837
KLLA0_F08954g
KLLA0F08954p.
    
 0.832
Your Current Organism:
Kluyveromyces lactis
NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140
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