STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_F07447gYALI0F07447p. (250 aa)    
Predicted Functional Partners:
YALI0_E04741g
YALI0E04741p.
   
 0.998
YALI0_C03784g
Ribonuclease P protein subunit.
   
  0.998
YALI0_E29007g
YALI0E29007p.
   
  0.997
YALI0_E26587g
YALI0E26587p.
   
  0.997
YALI0_B04752g
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
   
 0.997
YALI0_A02178g
YALI0A02178p.
   
  0.997
YALI0_B14311g
YALI0B14311p.
   
  0.984
YALI0_F30393g
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.948
YALI0_E00858g
YALI0E00858p.
   
 
 0.945
YALI0_D03355g
YALI0D03355p.
   
 
  0.901
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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