STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_F00176gYALI0F00176p. (391 aa)    
Predicted Functional Partners:
YALI0_B02552g
YALI0B02552p.
   
 
 0.781
YALI0_A00979g
YALI0A00979p.
   
 0.616
YALI0_F04312g
YALI0F04312p.
  
 0.586
YALI0_C18359g
YALI0C18359p.
  
 
0.582
YALI0_B02684g
YALI0B02684p.
  
  
 0.502
YALI0_D27038g
YALI0D27038p.
  
  
 0.499
YALI0_D19008g
YALI0D19008p.
   
 
 0.461
YALI0_F21659g
YALI0F21659p.
   
 
 0.454
CCS1
Superoxide dismutase 1 copper chaperone; Copper chaperone for superoxide dismutase 1 (SOD1). Binds copper ions and delivers them specifically to SOD1 (By similarity).
  
  
 0.438
YALI0_C08481g
YALI0C08481p.
 
      0.406
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.