STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_E23243gYALI0E23243p. (278 aa)    
Predicted Functional Partners:
YALI0_E00594g
YALI0E00594p.
   
 0.972
YALI0_A03113g
YALI0A03113p.
    
 0.972
SEC9
Protein transport protein SEC9; Belongs to the SNAP-25 family.
   
 0.965
YALI0_C23947g
YALI0C23947p.
   
 0.943
YALI0_E22044g
YALI0E22044p; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.931
SEC22
Protein transport protein SEC22; Required for transport from the ER to the Golgi complex. Belongs to the synaptobrevin family.
   
 0.910
YALI0_D25872g
YALI0D25872p.
  
 
 
0.902
YALI0_B10780g
YALI0B10780p.
  
  
 
0.901
YALI0_C16819g
YALI0C16819p.
    
 0.847
YALI0_E29249g
YALI0E29249p.
    
 0.823
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.