HUT1 protein (Yarrowia lipolytica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HUT1

UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily. (365 aa)

Predicted Functional Partners:

YALI0_F23089g

0.576

YALI0_E24123g

0.571

VRG4

0.564

YALI0_E24959g

0.530

YALI0_B10714g

0.525

YALI0_D05335g

0.513

YALI0_B18298g

0.485

YALI0_B15304g

0.412

Your Current Organism:

Yarrowia lipolytica

NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HUT1	VRG4	Q6C4X5	Q6C0U0	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	GDP-mannose transporter; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.	0.564
HUT1	YALI0_B10714g	Q6C4X5	Q6CF31	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	YALI0B10714p.	0.525
HUT1	YALI0_B15304g	Q6C4X5	Q6CEI8	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	Amidophosphoribosyltransferase.	0.412
HUT1	YALI0_B18298g	Q6C4X5	B5FVB6	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	YALI0B18298p.	0.485
HUT1	YALI0_D05335g	Q6C4X5	Q6CA72	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	YALI0D05335p.	0.513
HUT1	YALI0_E24123g	Q6C4X5	Q6C4S4	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	YALI0E24123p.	0.571
HUT1	YALI0_E24959g	Q6C4X5	Q6C4N7	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	YALI0E24959p.	0.530
HUT1	YALI0_F23089g	Q6C4X5	Q6C0N8	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	YALI0F23089p.	0.576
VRG4	HUT1	Q6C0U0	Q6C4X5	GDP-mannose transporter; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	0.564
VRG4	YALI0_B10714g	Q6C0U0	Q6CF31	GDP-mannose transporter; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.	YALI0B10714p.	0.513
VRG4	YALI0_D05335g	Q6C0U0	Q6CA72	GDP-mannose transporter; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.	YALI0D05335p.	0.458
VRG4	YALI0_E24123g	Q6C0U0	Q6C4S4	GDP-mannose transporter; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.	YALI0E24123p.	0.598
VRG4	YALI0_E24959g	Q6C0U0	Q6C4N7	GDP-mannose transporter; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.	YALI0E24959p.	0.578
VRG4	YALI0_F23089g	Q6C0U0	Q6C0N8	GDP-mannose transporter; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.	YALI0F23089p.	0.639
YALI0_B10714g	HUT1	Q6CF31	Q6C4X5	YALI0B10714p.	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	0.525
YALI0_B10714g	VRG4	Q6CF31	Q6C0U0	YALI0B10714p.	GDP-mannose transporter; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.	0.513
YALI0_B10714g	YALI0_E24123g	Q6CF31	Q6C4S4	YALI0B10714p.	YALI0E24123p.	0.519
YALI0_B10714g	YALI0_F23089g	Q6CF31	Q6C0N8	YALI0B10714p.	YALI0F23089p.	0.412
YALI0_B15304g	HUT1	Q6CEI8	Q6C4X5	Amidophosphoribosyltransferase.	UDP-galactose transporter homolog 1; May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.	0.412
YALI0_B15304g	YALI0_B18298g	Q6CEI8	B5FVB6	Amidophosphoribosyltransferase.	YALI0B18298p.	0.476

page 1 of 2

Server load: low (14%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Textmining

Neighborhood

Databases

Fusion

© STRING Consortium 2023

Credits

Access

Info

About