STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_E00880gYALI0E00880p. (725 aa)    
Predicted Functional Partners:
ATM1
Iron-sulfur clusters transporter ATM1, mitochondrial; Performs an essential function in the generation of cytoplasmic iron-sulfur proteins by mediating the ATP-dependent export of Fe/S cluster precursors synthesized by NFS1 and other mitochondrial proteins. Hydrolyzes ATP. Binds glutathione and may function by transporting a glutathione-conjugated iron-sulfur compound (By similarity).
   
0.793
YALI0_A17941g
YALI0A17941p.
   
  
 0.588
YALI0_F04796g
YALI0F04796p.
      
 0.540
YALI0_F19470g
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
  
 0.496
YALI0_A20108g
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
   
  
 0.460
YALI0_C06391g
YALI0C06391p.
   
 0.434
YALI0_F14861g
YALI0F14861p.
 
 
 0.426
YALI0_D18359g
YALI0D18359p.
   
  
 0.417
YALI0_F03993g
YALI0F03993p.
   
 0.405
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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