STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_C21626gYALI0C21626p. (266 aa)    
Predicted Functional Partners:
SEC22
Protein transport protein SEC22; Required for transport from the ER to the Golgi complex. Belongs to the synaptobrevin family.
   
 0.997
YALI0_C15334g
YALI0C15334p.
    
 0.981
YALI0_A07689g
YALI0A07689p.
   
 0.975
YALI0_B12914g
YALI0B12914p.
    
 0.971
YALI0_C23947g
YALI0C23947p.
    
 0.962
YALI0_C16819g
YALI0C16819p.
   
 0.933
YKT6
Synaptobrevin homolog YKT6.
    
 0.925
YALI0_C10846g
YALI0C10846p.
     
 0.879
BOS1
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex; Belongs to the BOS1 family.
    
 0.850
YALI0_D23353g
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.848
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.