STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_A00781gYALI0A00781p. (197 aa)    
Predicted Functional Partners:
YALI0_F08921g
Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...]
  
 0.915
YALI0_F24893g
Tryptophan synthase.
   
 0.914
YALI0_F12199g
YALI0F12199p.
  
 
 0.802
YALI0_D11110g
YALI0D11110p.
    
 0.748
YALI0_F09669g
YALI0F09669p; Belongs to the EF-1-beta/EF-1-delta family.
    
 
 0.667
YALI0_D13090g
YALI0D13090p.
   
 
 0.660
YALI0_C03245g
YALI0C03245p.
    
 
 0.655
YALI0_D14520g
YALI0D14520p.
  
 
 0.624
YALI0_E13486g
YALI0E13486p.
  
  
 0.616
YALI0_D25234g
YALI0D25234p.
  
  
 0.616
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.