STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTH2Uncharacterized protein. (453 aa)    
Predicted Functional Partners:
Q6FQQ0_CANGA
Uncharacterized protein.
   
 
 0.972
Q6FKW1_CANGA
RNase_PH domain-containing protein.
   
  0.904
Q6FL64_CANGA
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
 0.883
Q6FVN7_CANGA
Uncharacterized protein.
    
 
 0.855
Q6FLE6_CANGA
Nudix hydrolase domain-containing protein.
   
 0.829
Q6FXB2_CANGA
Uncharacterized protein.
    
 0.751
AFT1
Uncharacterized protein.
   
 
 0.736
Q6FTE6_CANGA
Uncharacterized protein.
    
 0.722
Q6FP13_CANGA
EXOSC1 domain-containing protein.
     
 0.714
Q6FRN4_CANGA
Uncharacterized protein.
    
 0.713
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, [. glabrata CBS 138, [Candida] glabrata CBS 138
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