STRINGSTRING
TFB3 protein (Candida glabrata) - STRING interaction network
"TFB3" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFB3Hypothetical protein; Acts as component of the general transcription and DNA repair factor IIH (TFIIH or factor B), which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA. TFIIH as CTD kinase activity and DNA-dependent ATPase activity, and is essential for polymerase II transcription (By similarity) (330 aa)    
Predicted Functional Partners:
XP_448449.1
Hypothetical protein (367 aa)
     
  0.991
XP_447246.1
Hypothetical protein (307 aa)
     
  0.990
TFB2
Hypothetical protein; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (504 aa)
     
  0.989
XP_449286.1
Hypothetical protein (775 aa)
     
  0.987
XP_448187.1
Hypothetical protein (611 aa)
     
  0.984
TFB4
Hypothetical protein; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA. Has a role in the initiation of transcription (By similarity) (335 aa)
     
  0.982
XP_449135.1
Hypothetical protein (862 aa)
     
  0.974
XP_446539.1
Hypothetical protein (439 aa)
     
  0.966
ACT1
Hypothetical protein; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells (375 aa)
       
      0.961
XP_449601.1
Hypothetical protein; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (315 aa)
     
  0.946
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
Server load: low (8%) [HD]