STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX6Peroxisomal biogenesis factor 6; Involved in peroxisome biosynthesis. (1021 aa)    
Predicted Functional Partners:
AGOS_AFR371W
AFR371Wp.
  
0.999
AGOS_AGR381C
AGR381Cp.
    
 0.926
PEX5
Peroxisomal targeting signal receptor; Binds to the C-terminal PTS1-type tripeptide peroxisomal targeting signal (SKL-type) and plays an essential role in peroxisomal protein import.
   
 0.901
AGOS_ACR230C
ACR230Cp.
    
 0.867
AGOS_AER390W
AER390Wp.
   
 0.864
AGOS_ABR067C
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.853
AGOS_ACR280C
ACR280Cp.
    
 0.849
AGOS_AGL190W
AGL190Wp.
     
 0.824
AGOS_AER057W
AER057Wp.
    
 0.771
AGOS_AFR314W
AFR314Wp.
    
 0.738
Your Current Organism:
Eremothecium gossypii
NCBI taxonomy Id: 284811
Other names: Ashbya gossypii ATCC 10895, E. gossypii ATCC 10895, Eremothecium gossypii ATCC 10895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.