STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGOS_AER257WAER257Wp. (477 aa)    
Predicted Functional Partners:
AGOS_AAR139W
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.998
AGOS_ACR048C
ACR048Cp.
   
 0.994
AGOS_AAR177W
AAR177Wp; Belongs to the universal ribosomal protein uS5 family.
    
 0.992
AGOS_AEL152W
AEL152Wp; Belongs to the universal ribosomal protein uS11 family.
    
 0.990
AGOS_ACL076W
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.988
RPS6
40S ribosomal protein S6.
   
  0.984
AGOS_AEL255W
AEL255Wp; Belongs to the universal ribosomal protein uS4 family.
   
  0.984
AGOS_AFL091W
AFL091Wp; Belongs to the protein kinase superfamily.
    
 0.980
PNO1
Pre-rRNA-processing protein PNO1; Required for small ribosomal subunit (SSU) synthesis. Has a role in the processing of early nucleolar and late cytoplasmic pre-RNA species (By similarity).
   
 0.959
AGOS_AER051C
AER051Cp.
   
 0.954
Your Current Organism:
Eremothecium gossypii
NCBI taxonomy Id: 284811
Other names: Ashbya gossypii ATCC 10895, E. gossypii ATCC 10895, Eremothecium gossypii ATCC 10895
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