STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGOS_ADL160WADL160Wp. (526 aa)    
Predicted Functional Partners:
AGOS_AAR178C
AAR178Cp.
    
 
 0.971
AGOS_AGR010C
AGR010Cp.
  
 
 0.935
AGOS_AER219C
AER219Cp.
   
 
 0.763
AGOS_AGR009C
AGR009Cp.
    
 0.663
RNA14
mRNA 3'-end-processing protein RNA14; Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 
 0.644
AGOS_AAR190W
AAR190Wp; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 
 0.626
AGOS_ADR183C
ADR183Cp.
   
 0.619
CFT1
Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family.
    
 
 0.458
AGOS_AGR190C
AGR190Cp.
      
 0.455
AGOS_ABL002C
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
      
 0.455
Your Current Organism:
Eremothecium gossypii
NCBI taxonomy Id: 284811
Other names: Ashbya gossypii ATCC 10895, E. gossypii ATCC 10895, Eremothecium gossypii ATCC 10895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.