Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGOS_AAR129C | AGOS_ACR073C | Q75EF2 | Q75C44 | Peptide hydrolase; Belongs to the peptidase M28 family. | ACR073Cp; Belongs to the peptidase S9B family. | 0.455 |
AGOS_AAR129C | AGOS_AER451W | Q75EF2 | Q755R7 | Peptide hydrolase; Belongs to the peptidase M28 family. | AER451Wp. | 0.443 |
AGOS_AAR129C | OAF3 | Q75EF2 | Q75BN0 | Peptide hydrolase; Belongs to the peptidase M28 family. | Oleate activated transcription factor 3; Transcriptional inhibitor with a significantly increased number of target genes in response to oleate; Belongs to the OAF3 family. | 0.443 |
AGOS_ACR073C | AGOS_AAR129C | Q75C44 | Q75EF2 | ACR073Cp; Belongs to the peptidase S9B family. | Peptide hydrolase; Belongs to the peptidase M28 family. | 0.455 |
AGOS_AER451W | AGOS_AAR129C | Q755R7 | Q75EF2 | AER451Wp. | Peptide hydrolase; Belongs to the peptidase M28 family. | 0.443 |
OAF3 | AGOS_AAR129C | Q75BN0 | Q75EF2 | Oleate activated transcription factor 3; Transcriptional inhibitor with a significantly increased number of target genes in response to oleate; Belongs to the OAF3 family. | Peptide hydrolase; Belongs to the peptidase M28 family. | 0.443 |