STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vba2Uncharacterized transporter C460.03. (567 aa)    
Predicted Functional Partners:
avt5
Vacuolar amino acid transporter 5; Vacuolar amino acid transporter involved in the vacuolar uptake of histidine, glutamate, tyrosine, arginine, lysine, and serine. Required for sporulation; Belongs to the amino acid/polyamine transporter 2 family.
   
 
 0.877
SPBC460.01c
Uncharacterized amino-acid permease C460.01c.
   
 
 0.852
SPBC460.02c
Putative glutathione S-transferase C460.02c; Involved in the oxidative stress response and detoxification.
   
  
 0.850
SPBC460.05
Uncharacterized transporter C460.05.
    
 
 0.849
put2
Probable delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.789
avt3
Vacuolar amino acid transporter 3; Involved in amino acid efflux from the vacuole to the cytoplasm. Capable of transporting large neutral amino acids including tyrosine, glutamine, asparagine, isoleucine and leucine (By similarity). Required for spore formation; Belongs to the amino acid/polyamine transporter 2 family.
   
 
 0.772
SPBPB21E7.09
Probable L-asparaginase 3; Belongs to the asparaginase 1 family.
      
 0.759
SPBC460.04c
Putative alpha-ketoglutarate-dependent sulfonate dioxygenase; Acts as an alpha-ketoglutarate-dependent dioxygenase active on sulfonates.
   
  
 0.758
SPBPB10D8.01
Uncharacterized transporter PB10D8.01.
    
 
 0.724
atg22
Autophagy-related protein 22; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
      
 0.630
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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