STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl2854S ribosomal protein L28, mitochondrial; Involved in mitochondrial genome encoded proteins translation. (118 aa)    
Predicted Functional Partners:
mrpl23
54S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.998
mrpl17
54S ribosomal protein L17, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL46 family.
   
 
 0.994
img1
54S ribosomal protein subunit img1, mitochondrial.
   
 
 0.992
mrpl27
54S ribosomal protein L27, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL41 family.
   
 
 0.990
mrpl35
54S ribosomal protein L35, mitochondrial; Belongs to the phosphatidylethanolamine-binding protein family. Mitochondrion-specific ribosomal protein mL38 subfamily.
   
 
 0.989
mrp7
54S ribosomal protein L27, mitochondrial; Involved in mitochondrial genome encoded proteins translation.
   
 
 0.989
mrpl16
54S ribosomal protein L16, mitochondrial.
   
 
 0.989
rtc6
54S ribosomal protein c83.06c, mitochondrial; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.988
mrpl4
54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family.
   
 
 0.986
mrpl32
Probable 54S ribosomal protein L32, mitochondrial; Component of the large subunit of mitochondrial ribosome. Belongs to the bacterial ribosomal protein bL32 family.
   
   0.985
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.