STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ear1SPRY domain-containing protein C285.10c. (382 aa)    
Predicted Functional Partners:
gid7
Uncharacterized WD repeat-containing protein C343.04c.
   
 
 0.904
tre1
Inactive zinc metalloprotease C354.09c.
   
 
 0.885
gid8
Uncharacterized protein C12B10.13.
   
 
 0.884
pib1
Putative E3 ubiquitin-protein ligase C36B7.05c; Functions as an E3 ubiquitin-protein ligase. Binds phospholipid vesicles containing phosphatidylinositol 3-phosphate.
   
  
 0.876
gid2
LisH domain-containing protein C29A3.03c.
   
 
 0.858
itr1
Myo-inositol transporter 1; Transporter for myo-inositol.
   
  
 0.827
gid9
Protein fyv10; Involved in the proteasome-dependent degradation of fructose- 1,6-bisphosphatase; Belongs to the FYV10 family.
   
 
 0.826
bsd1
Probable metal homeostasis protein bsd1; Required for homeostasis of heavy metal ions such as cadmium, cobalt and copper; Belongs to the BSD2 family.
   
  
 0.786
fur4
Uracil permease; Transport of uracil; Belongs to the purine-cytosine permease (2.A.39) family.
      
 0.735
gid4
Uncharacterized protein C3H1.14.
   
 
 0.733
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.