STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gid1Uncharacterized protein C1259.12c. (491 aa)    
Predicted Functional Partners:
gid4
Uncharacterized protein C3H1.14.
    
 0.998
gid8
Uncharacterized protein C12B10.13.
   
 0.998
gid7
Uncharacterized WD repeat-containing protein C343.04c.
   
 0.998
gid9
Protein fyv10; Involved in the proteasome-dependent degradation of fructose- 1,6-bisphosphatase; Belongs to the FYV10 family.
   
 0.983
gid10
Uncharacterized protein P8A3.13c.
    
 0.983
gid2
LisH domain-containing protein C29A3.03c.
   
 0.982
SPAPJ691.02
Protein yippee-like PJ691.02; Belongs to the yippee family.
   
 
 0.873
fbp1
Fructose-1,6-bisphosphatase.
    
 
 0.824
sum3
ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Inactivation of ded1 blocks mitotic cell cycle progression at G1 and G2/M. Induces sexual development and ascus formation.
    
 
 0.768
mde6
Mei4-dependent protein 6.
   
 
 0.757
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.