STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps110140S ribosomal protein S11-A. (152 aa)    
Predicted Functional Partners:
rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.995
rps2
40S ribosomal protein S2.
  
 0.994
rps20
40S ribosomal protein S20; Belongs to the universal ribosomal protein uS10 family.
  
 0.994
rps13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.994
rps27
40S ribosomal protein S27.
   
 0.993
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.993
rpl4301
60S ribosomal protein L43-A.
   
 
 0.993
rps29
40S ribosomal protein S29; Belongs to the universal ribosomal protein uS14 family.
  
 0.992
tef3
Elongation factor 3; The main role of EF-3 may be to transduce nucleoside triphosphate energy into mechanical energy for translocation during translation. EF-3 stimulates EF-1-alpha-dependent binding of aminoacyl- tRNA to the ribosome.
   
   0.992
rpl801
60S ribosomal protein L2-A.
  
 
 0.992
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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