STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPBPB2B2.15VEL1-related protein SPBPB2B2.15; Belongs to the VEL1 family. (203 aa)    
Predicted Functional Partners:
loz1
Zinc finger protein C25B8.19c.
      
 0.876
zrt1
Zinc-regulated transporter 1; High-affinity zinc transport protein. Regulates intracellular zinc levels; Belongs to the ZIP transporter (TC 2.A.5) family.
      
 0.761
alr2
Putative alanine racemase 2; Belongs to the alanine racemase family.
      
 0.752
gcd1
Probable glucose-6-phosphate 1-dehydrogenase C794.01c; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. The main function of this enzyme is to provide reducing power (NADPH) and pentose phosphates for fatty acid and nucleic acid synthesis (By similarity); Belongs to the glucose-6-phosphate dehydrogenase family.
      
 0.630
dea2
Adenine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. Also exhibits a low activity towards N(6)- substituted adenines that are commonly known as the plant hormones cytokinins.
      
 0.630
zym1
Metallothionein zym1; Metallothionein involved in tolerance to zinc and cadmium.
      
 0.630
ecl2
Extender of the chronological lifespan protein 2; Involved in chronological cell aging.
      
 0.606
ecl3
Extender of the chronological lifespan protein ecl3; Involved in chronological cell aging.
      
 0.579
adh4
Alcohol dehydrogenase 4; Involved in ethanol oxidation in mitochondria. Belongs to the iron-containing alcohol dehydrogenase family.
   
  
 0.576
SPAC977.05c
VEL1-related protein AC977.05c; Belongs to the VEL1 family.
   
  
0.502
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.