STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftm5Uncharacterized membrane protein SPBC1348.02. (344 aa)    
Predicted Functional Partners:
SPBC1348.01
UPF0494 membrane protein C1348.01.
   
    0.495
SPAC212.01c
UPF0494 membrane protein SPAC212.01c.
   
    0.495
ftm1
Uncharacterized membrane protein SPAC977.01.
   
   
0.495
SPAC750.06c
UPF0494 membrane protein C750.06c.
   
    0.495
ftm4
Uncharacterized membrane protein C750.05c.
   
   
0.495
ftm6
UPF0742 protein C1348.03.
   
    0.478
SPBC1348.05
Uncharacterized transporter C1348.05.
   
    0.474
SPBC1348.04
Uncharacterized methyltransferase C1348.04; Probable methyltransferase.
   
    0.455
SPAC750.03c
Uncharacterized methyltransferase C750.03c; Probable methyltransferase.
   
    0.454
SPAC212.04c
UPF0494 membrane protein C212.04c.
   
    0.452
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.