STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arg7Argininosuccinate lyase. (461 aa)    
Predicted Functional Partners:
arg12
Argininosuccinate synthase.
 
 0.998
arg11
N-acetyl-gamma-glutamyl-phosphate reductase; In the C-terminal section; belongs to the NAGSA dehydrogenase family.
  
 
 0.997
arg41
Probable argininosuccinate lyase.
  
 
0.944
ade8
Adenylosuccinate lyase.
    
 0.918
arg3
Ornithine carbamoyltransferase, mitochondrial; Ornithine carbamoyltransferase involved in the synthesis of arginine from glutamate via ornithine and the urea cycle.
 
  
 0.891
arg6
Amino-acid acetyltransferase, mitochondrial; N-acetylglutamate synthase involved in arginine biosynthesis. Belongs to the acetyltransferase family.
  
 
 0.885
car1
Arginase; Belongs to the arginase family.
   
 
 0.883
aru1
Arginase; Belongs to the arginase family.
     
 0.882
idp1
Probable isocitrate dehydrogenase [NADP], mitochondrial.
     
 0.860
cit1
Probable citrate synthase, mitochondrial; Belongs to the citrate synthase family.
    
 0.860
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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