STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mub1MYND-type zinc finger protein C31F10.10c. (574 aa)    
Predicted Functional Partners:
SPAC3C7.04
Uncharacterized transcriptional regulatory protein C3C7.04.
   
  
 0.875
SPAC222.18
Putative splicing factor C222.18; Has a role in pre-mRNA splicing where it is involved in spliceosome assembly; Belongs to the splicing factor SR family.
      
 0.760
SPCC126.11c
Uncharacterized RNA-binding protein C126.11c.
      
 0.760
srp40
LisH domain-containing protein C1711.05.
      
 0.760
Tf2-1
Transposon Tf2-1 polyprotein.
      
 0.755
SPCC663.08c
Uncharacterized oxidoreductase C663.08c.
      
 0.749
SPCC320.03
Uncharacterized transcriptional regulatory protein C320.03.
   
  
 0.584
amk2
5'-AMP-activated protein kinase subunit beta; Beta subunit of AMP-activated protein kinase (AMPK), which is required for transcriptional, metabolic, and developmental adaptations in response to glucose limitation. Has a structural role, mediating heterotrimer formation, and a regulatory role, defining carbon source- regulated subcellular location and substrate specificity of the AMPK kinase complex.
    
 
 0.475
sde2
Telomere maintenance protein SDE2; Plays a role in the regulation of telomeric and centromeric silencing. Contributes to the prevention of abnormal telomere elongation. Required for chromosome segregation to daughter cells in mitosis and meiosis. May participate in the recruitment of the histone deacetylase silencing complex SHREC, which prevents transcription at telomeres; Belongs to the SDE2 family.
      
 0.428
rmn1
Uncharacterized RNA-binding protein C902.04.
      
 0.422
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.