STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPCC777.17cProbable 54S ribosomal protein L9, mitochondrial. (101 aa)    
Predicted Functional Partners:
mrps9
37S ribosomal protein S9, mitochondrial.
   
 
 0.999
rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
mrpl8
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
mrp7
54S ribosomal protein L27, mitochondrial; Involved in mitochondrial genome encoded proteins translation.
  
 
 0.999
mrpl12
54S ribosomal protein L12, mitochondrial; Belongs to the bacterial ribosomal protein bL12 family.
   
 
 0.999
mrp17
37S ribosomal protein MRP17, mitochondrial; Belongs to the bacterial ribosomal protein bS6 family.
  
 
 0.999
img1
54S ribosomal protein subunit img1, mitochondrial.
   
 
 0.999
mrps16
Probable 37S ribosomal protein S16, mitochondrial.
   
 
 0.998
mrpl24
54S ribosomal protein L24, mitochondrial.
  
 
 0.998
mrpl39
54S ribosomal protein L39, mitochondrial.
  
 
 0.998
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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