STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pop100Ribonucleases P/MRP protein subunit pop1; Required for processing of 5.8S rRNA (short form) at site A3 and for 5' and 3' processing of pre-tRNA; Belongs to the POP1 family. (698 aa)    
Predicted Functional Partners:
rpp1
Probable ribonuclease P protein subunit 3; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.999
pop4
Probable ribonuclease P protein subunit 1; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.999
rmp1
Ribonuclease MRP protein subunit rmp1; Functions as part of ribonuclease MRP (RNase MRP), which is involved in rRNA processing in mitochondria.
    
 0.999
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP, which cleaves pre-rRNA sequences (By similarity).
    
 0.999
rpr2
Ribonuclease P protein subunit rpr2; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 4 family.
    
 0.998
pop23
Ribonucleases P/MRP protein subunit pop3; Required for processing of 5.8S rRNA (short form) at site A3 and for 5'- and 3'-processing of pre-tRNA.
   
  0.997
rpp21
Uncharacterized protein C16C4.19.
    
  0.996
pop7
Ribonucleases P/MRP protein subunit POP7; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP, which cleaves pre-rRNA sequences (By similarity). Belongs to the histone-like Alba family.
     
 0.974
rpp40
Uncharacterized protein C6C3.09.
    
 0.969
pop8
Probable ribonucleases P protein subunit pop8; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
  0.900
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.