STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aah3Alpha-amylase 3; Has a role in cell wall biosynthesis where it is involved in maintaining cell wall strength and shape. (564 aa)    
Predicted Functional Partners:
meu17
Probable glucoamylase.
    
 0.964
suc2
Putative invertase; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.798
inv1
Invertase; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.787
mok12
Cell wall alpha-1,3-glucan synthase mok12.
      
 0.725
gto2
Uncharacterized family 31 glucosidase C30D11.01c; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.699
agl1
Alpha-glucosidase; Hydrolyzes malto-oligosaccharides, but has a low activity toward soluble starch.
  
 
 0.699
gto1
Uncharacterized family 31 glucosidase C1039.11c.
  
 
 0.699
mal1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family.
 
   
0.683
knh4
Uncharacterized serine-rich protein C1E8.05.
   
  
 0.642
cis4
Probable zinc transporter cis4; Probable zinc transporter involved in Golgi membrane trafficking through the regulation of zinc homeostasis.
   
 
 0.607
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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