STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10; Belongs to the universal ribosomal protein uL10 family. (266 aa)    
Predicted Functional Partners:
RPL27A
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
RPL3-1
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
RPS3
40S ribosomal protein S3.
  
 
 0.999
RPL39
60S ribosomal protein L39.
  
 0.999
RPS19
40S ribosomal protein S19.
  
 
 0.999
Q8SQU2_ENCCU
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
RPS7
40S ribosomal protein S7.
   
 
 0.999
Q8SQX6_ENCCU
40S RIBOSOMAL PROTEIN S20.
  
 
 0.999
Q8SR06_ENCCU
40S RIBOSOMAL PROTEIN S24.
   
 
 0.999
RPL44
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.999
Your Current Organism:
Encephalitozoon cuniculi
NCBI taxonomy Id: 284813
Other names: E. cuniculi GB-M1, Encephalitozoon cuniculi GB-M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.